GitHub / scverse/fast-array-utils / commits
Fast array utilities
| SHA | Message | Author | Date | Stats |
|---|---|---|---|---|
| 940727fe |
fix: improve variance precision (#127)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 9df6b5ae | fix: Have `sum` operate on the passed dtype. (#125) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 49bdfac7 |
[pre-commit.ci] pre-commit autoupdate (#126)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 5c7ad02b |
[pre-commit.ci] pre-commit autoupdate (#123)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 219eea55 |
[pre-commit.ci] pre-commit autoupdate (#122)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m>, Philipp A. <f****p@w****e> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| f6780016 |
[pre-commit.ci] pre-commit autoupdate (#121)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 1853e726 |
[pre-commit.ci] pre-commit autoupdate (#120)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m>, Philipp A. <f****p@w****e> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| 87854426 |
remove numpy 1 support (#119)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| 71d0331a |
[pre-commit.ci] pre-commit autoupdate (#118)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| 4299ca73 |
[pre-commit.ci] pre-commit autoupdate (#117)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| f2102e00 |
[pre-commit.ci] pre-commit autoupdate (#115)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 3813c069 | fix: actually fix dask (#114) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 17e3b354 | fix: Finalize dask patch (#113) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 6645eadb |
[pre-commit.ci] pre-commit autoupdate (#111)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| ec47a24f |
[pre-commit.ci] pre-commit autoupdate (#110)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m>, Philipp A. <f****p@w****e> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 8ed71d30 |
[pre-commit.ci] pre-commit autoupdate (#109)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| a7b2a101 |
[pre-commit.ci] pre-commit autoupdate (#108)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| b3c7c982 |
[pre-commit.ci] pre-commit autoupdate (#107)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 4c6e9061 |
[pre-commit.ci] pre-commit autoupdate (#106)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 85ca787b |
[pre-commit.ci] pre-commit autoupdate (#105)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m>, Phil Schaf <f****p@w****e> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 9ba493b1 |
[pre-commit.ci] pre-commit autoupdate (#103)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m>, Philipp A. <f****p@w****e> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 9a5c1e4e | Unpin doc deps (#102) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 566a194d |
[pre-commit.ci] pre-commit autoupdate (#101)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m>, Philipp A. <f****p@w****e> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| d524d7f2 |
[pre-commit.ci] pre-commit autoupdate (#99)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m>, Philipp A. <f****p@w****e> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| efe0308e |
Add support for numpy 1.25+ (#96)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 8e9cf909 | Derive test configs from hatch (#98) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 1db1f50b | Add `order` parameter to `to_dense` (#94) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 2a0d3231 |
[pre-commit.ci] pre-commit autoupdate (#95)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m>, Philipp A. <f****p@w****e> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 60d5afbe | Widen line lengths for overload authoring (#93) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| f3b1eaad | Add tests for sparse mean_var accuracy (#92) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 8bafd80f | make array_type a session-scoped fixture (#91) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 630b0cbd | Fix Dask handling for chunks with 1-wide dimension (#87) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| c34cb6d5 | Support older anndata versions (#86) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 46743722 | Allow use on 1d arrays (#84) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| a1643f95 | prepare tests for ndim (#85) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 75506e95 |
[pre-commit.ci] pre-commit autoupdate (#83)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m>, Philipp A. <f****p@w****e> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 2a948888 | Add pypi badge (#81) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 788360e4 | Flesh out readme (#80) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| ebc890f1 | Add a scipy.sparse numba extension (#73) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 104bf1c9 | bigger benchmarks (#75) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 3ff85227 | add caching to _mean_var (#74) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 42137b10 | Improve docs (#72) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| d351c0f7 | Allow and test slow to_dense (without numba) (#71) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 32f2aeeb | minimize deps (#68) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 236769b2 | Allow array_type to convert from all types it supports (#67) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| ec9b7b8b |
[pre-commit.ci] pre-commit autoupdate (#66)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 39f71f73 |
[pre-commit.ci] pre-commit autoupdate (#65)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m>, Philipp A. <f****p@w****e> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| d47de415 | CuPy support (#51) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 7319f892 | Add overloads to docs (#56) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 39935ee4 |
[pre-commit.ci] pre-commit autoupdate (#57)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 12802842 | `anndata.abc.CS{RC}Dataset` support (#50) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| c854c5ba | Add Dask types (#49) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 9761beef |
Add mean_var (#46)
Co-authored-by: Ilan Gold <i****d@g****m> |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 2c7a94a5 |
[pre-commit.ci] pre-commit autoupdate (#48)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| a38413da | implement and test mean (#44) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| bdae03a1 | Move out dask_viz fixture | Philipp A. <f****p@w****e> | over 1 year ago | |
| e0f79733 | Fix pytest plugin (#42) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 2c632eae | Rename `asarray` to `to_dense` (#35) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 96c418e4 | Actually typecheck properly (#40) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| df17fa79 | Modify collection instead of skipping (#39) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| a7e216be | Small fixes (#38) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| d459cca8 | Add stats.is_constant (#21) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| ef6b8473 | rename benchmark | Philipp A. <f****p@w****e> | over 1 year ago | |
| 1bebabf2 | parametrize benchmarks, skip matrix (#36) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| efa2986b | Refactor test utils to use a class (#30) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 042b1088 |
[pre-commit.ci] pre-commit autoupdate (#33)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 15b5877a | try skipping second .xml generation (#29) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 13bcd23b | refactor imports (#26) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 8168c990 | fix codspeed (#25) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 9f82a088 | [pre-commit.ci] pre-commit autoupdate (#23) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| ca0fff58 | Sum docs (#20) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 6b46bdee | remove dtypes (#19) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| a33cf9ae | Add sum (#13) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| f241148e | Sparse in dask (#16) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 130038ef |
[pre-commit.ci] pre-commit autoupdate (#15)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 2a9303b4 |
[pre-commit.ci] pre-commit autoupdate (#14)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 710d34e8 | Move APIs (#12) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 7bc11f99 | fix numba coverage | Philipp A. <f****p@w****e> | over 1 year ago | |
| 7ef237b7 | add benchmarks (#11) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| e231d657 | add cov badge | Philipp A. <f****p@w****e> | over 1 year ago | |
| 1925babe | fix token | Philipp A. <f****p@w****e> | over 1 year ago | |
| 0d0678bb | Add zarr support (#10) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 713b8524 | Add CI badge | Philipp A. <f****p@w****e> | over 1 year ago | |
| 14a1483b |
add CI (#8)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 057a0e26 | Add readme badge (#7) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 56202a48 | fix types and start docs (#6) |
Philipp A. <f****p@w****e>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 94be74c3 | test asarray | Philipp A. <f****p@w****e> | over 1 year ago | |
| 4952f51e | renames | Philipp A. <f****p@w****e> | over 1 year ago | |
| bd2bd929 | dtype | Philipp A. <f****p@w****e> | over 1 year ago | |
| e93b41ad | fix test selection | Philipp A. <f****p@w****e> | over 1 year ago | |
| afcf7a9f | fix checks | Philipp A. <f****p@w****e> | over 1 year ago | |
| 497eb863 | tests | Philipp A. <f****p@w****e> | over 1 year ago | |
| 33bdde49 | WIP | Philipp A. <f****p@w****e> | over 1 year ago | |
| 5e515315 | init | Philipp A. <f****p@w****e> | over 1 year ago |