GitHub / rabernat/zarr-python / commits
| SHA | Message | Author | Date | Stats |
|---|---|---|---|---|
| d0c3b7fa | Add an issue template for feature requests (#3572) |
David Stansby <d****y@g****m>
Committed by: GitHub <n****y@g****m> |
10 months ago | |
| c8d8e643 |
Improve compatibility between old sphinx and new mkdocs setup (#3544)
Co-authored-by: Davis Bennett <d****t@g****m> |
Max Jones <1****s@u****m>
Committed by: GitHub <n****y@g****m> |
10 months ago | |
| eb1b6e86 |
chore: update pre-commit hooks (#3566)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
10 months ago | |
| 6df448f1 | chore: make tests faster (#3533) |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
10 months ago | |
| e6ef2b13 |
optimize shard writing (#3561)
Signed-off-by: Noah D. Brenowitz <n****2@g****m>, Noah D. Brenowitz <n****2@g****m>, Noah D. Brenowitz <n****2@g****m>, Noah D. Brenowitz <n****2@g****m>, Noah D. Brenowitz <n****2@g****m>, Noah D. Brenowitz <n****2@g****m>, Noah D. Brenowitz <n****2@g****m> |
Noah D. Brenowitz <n****2@g****m>
Committed by: GitHub <n****y@g****m> |
10 months ago | |
| b3e9aed3 | remove dead code (#3555) |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
10 months ago | |
| 591b895a | fix/simpler blosc tuning (#3553) |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
10 months ago | |
| b0e5c699 |
fix for failing numcodecs.zarr3 codecs (#3326)
Co-authored-by: Davis Bennett <d****t@g****m> |
Terraputix <t****x@m****g>
Committed by: GitHub <n****y@g****m> |
10 months ago | |
| b75aeb19 | Bump the actions group with 3 updates (#3549) |
dependabot[bot] <4****]@u****m>
Committed by: GitHub <n****y@g****m> |
10 months ago | |
| fe42655a | fix invalid blosc defaults (#3545) |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
10 months ago | |
| fc8e8ad1 | Fix 404 page (#3543) |
Max Jones <1****s@u****m>
Committed by: GitHub <n****y@g****m> |
10 months ago | |
| 82147c13 |
Doc update (#3539)
Co-authored-by: Davis Bennett <d****t@g****m> |
Christine Smit <c****t@n****v>
Committed by: GitHub <n****y@g****m> |
10 months ago | |
| d6d921e1 |
fsspec path handling (#3343)
Co-authored-by: Davis Bennett <d****t@g****m> |
Fredrik Jansson <f****n@t****l>
Committed by: GitHub <n****y@g****m> |
10 months ago | |
| 61ca06bc | fix: accept extra fields in array metadata (#3530) |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
10 months ago | |
| e3ee5912 | Fix: allow "bytes" as an alias for "variable_length_bytes" (#3532) |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
10 months ago | |
| 7fe95b5f |
DOC: a array -> an array (#3537)
Co-authored-by: Josh Moore <j****h@o****g> |
Christine P. Chai <s****p@g****m>
Committed by: GitHub <n****y@g****m> |
10 months ago | |
| bc86a613 | don't serialize consolidated metadata if it's `None` (#3535) |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
10 months ago | |
| 950066bf |
Bump the actions group with 2 updates (#3507)
Co-authored-by: dependabot[bot] <4****]@u****m>, Davis Bennett <d****t@g****m> Signed-off-by: dependabot[bot] <s****t@g****m> |
dependabot[bot] <4****]@u****m>
Committed by: GitHub <n****y@g****m> |
10 months ago | |
| 2adacb84 |
Document changes to async.concurrency defaults and performance considerations...
Co-authored-by: Davis Bennett <d****t@g****m> |
Joe Hamman <j****e@e****o>
Committed by: GitHub <n****y@g****m> |
10 months ago | |
| 6b7ce9c2 |
chore: update pre-commit hooks (#3509)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m>, Davis Bennett <d****t@g****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
10 months ago | |
| 14b372ce | feature: update default config setting for async.concurrency from 10->64 (#3526) |
Joe Hamman <j****e@e****o>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 9f69611d | chore(crc32c): replace crc32c with google-crc32c dependency (#3515) |
Joe Hamman <j****e@e****o>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 6811c948 | Imported name is not used anywhere in the module (#3300) |
Dimitri Papadopoulos Orfanos <3****s@u****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| dc5334e5 |
docs/examples (#3502)
Co-authored-by: Max Jones <1****s@u****m>, Max Jones <1****s@u****m> |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 49db79ab |
chore/doctests (#3500)
Co-authored-by: ruaridhg <r****g@u****m>, ruaridhg <3****g@u****m> |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| e0751ab9 |
Fix typing in store tests (#3394)
Co-authored-by: Davis Bennett <d****t@g****m> |
David Stansby <d****y@g****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| be519b00 |
Make ObjectStore a generic class (#3486)
Co-authored-by: Davis Bennett <d****t@g****m> |
David Stansby <d****y@g****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 2eb89e1f |
CacheStore containing source store and cache store (#3366)
Co-authored-by: ruaridhg <r****g@u****m>, Davis Bennett <d****t@g****m> |
ruaridhg <3****g@u****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 1cd4f7e0 | add experimental module (#3490) |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| e1990c0f | Fix string integer parsing (#3489) |
Ian Hunt-Isaak <i****k@g****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 48e7f4dc | fix pcodec resolution failure (#3483) |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 02784948 | Include shard/chunk shapes in size mismatch error (#3485) |
David Stansby <d****y@g****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 45756b0c |
Document StoreLike values in user guide (#3480)
Co-authored-by: Davis Bennett <d****t@g****m> |
Kimberly Meechan <2****h@u****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 2d3d7907 |
Customize color theme for docs (#3477)
Co-authored-by: Davis Bennett <d****t@g****m> |
Max Jones <1****s@u****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 64c2bdc5 | chore: update pre-commit hooks (#3481) |
Dimitri Papadopoulos Orfanos <3****s@u****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 24385abc | Changelog entry for docs change (#3476) |
Max Jones <1****s@u****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 8b35cf4f | Use mkdocs-material for Zarr-Python documentation (#3118) |
Max Jones <1****s@u****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| ef136e9d |
Add sharding to multiprocessing test (#3475)
Co-authored-by: Davis Bennett <d****t@g****m> |
Ziwen Liu <6****u@u****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| b5e0793a | 3.1.3 release notes (#3472) (#3474) |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| de947648 |
Prevent creation of arrays/groups under a parent array (#3407)
Co-authored-by: Davis Bennett <d****t@g****m> |
Kimberly Meechan <2****h@u****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 62551c70 | fix:*-like creation routines take kwargs (#2992) |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 68053326 |
Add registry for chunk key encodings for extensibility (#3436)
Co-authored-by: Davis Bennett <d****t@g****m> |
Remco Leijenaar <5****r@u****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 3c883a3c |
Add CLI for converting v2 metadata to v3 (#3257)
Co-authored-by: Davis Bennett <d****t@g****m> |
Kimberly Meechan <2****h@u****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 9eb2d280 |
docstring cleanup (#3390)
Co-authored-by: Tom Augspurger <t****8@g****m>, Tom Augspurger <t****8@g****m>, Tom Augspurger <t****8@g****m>, Tom Augspurger <t****8@g****m>, Tom Augspurger <t****8@g****m>, Tom Augspurger <t****8@g****m>, Tom Augspurger <t****8@g****m>, Tom Augspurger <t****8@g****m>, Tom Augspurger <t****8@g****m>, Tom Augspurger <t****8@g****m>, Tom Augspurger <t****8@g****m>, Tom Augspurger <t****8@g****m> |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
11 months ago | |
| 62d1a6ab | Minor fixes for zarr.codecs.numcodecs (#3459) |
Kimberly Meechan <2****h@u****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| a830d020 |
Raise helpful errors when opening a group with wrong node type. (#3444)
Co-authored-by: Davis Bennett <d****t@g****m> |
David Stansby <d****y@g****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| df161b24 |
Bump astral-sh/setup-uv from 6.6.1 to 6.7.0 in the actions group (#3455)
Co-authored-by: dependabot[bot] <4****]@u****m> Signed-off-by: dependabot[bot] <s****t@g****m> |
dependabot[bot] <4****]@u****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| bce30dd3 | chore/handle numcodecs codecs (#3376) |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| e76b1e0a | Fix nightly-wheel tag (#3450) |
Joe Hamman <j****e@e****o>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| 4011d511 |
allow int-like floats for int dtype fill values (#3448)
Co-authored-by: Ryan Abernathey <r****y@g****m>, Ryan Abernathey <r****y@g****m> |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| d3fa3f5e | Document that copy() functions are not implemented (#3442) |
David Stansby <d****y@g****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| af569568 | feature(ci): updload nightly wheel to scientific python anaconda repo (#3449) |
Joe Hamman <j****e@e****o>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| 27d689c6 | fix/shard iteration redux (#3422) |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| ee9c182a |
Bump the actions group across 1 directory with 4 updates (#3439)
Co-authored-by: dependabot[bot] <4****]@u****m> |
dependabot[bot] <4****]@u****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| a8da9209 |
obstore delete_dir (#3310)
Co-authored-by: Davis Bennett <d****t@g****m> |
Kenneth Li <k****i@s****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| 3d0e40e1 |
Bump pypa/gh-action-pypi-publish (#3434)
Co-authored-by: dependabot[bot] <4****]@u****m> Signed-off-by: dependabot[bot] <s****t@g****m> |
dependabot[bot] <4****]@u****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| ac95b4d9 | Pass read_only into LocalStore.open() (#3432) |
Stephan Hoyer <s****r@g****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| e738e2fb |
Raise more helpful errors in _dereference_path (#3392)
Co-authored-by: Davis Bennett <d****t@g****m> |
David Stansby <d****y@g****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| b4835432 | Fix creating groups with group() (#3431) |
David Stansby <d****y@g****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| 00e78142 | Ensure absolute paths work with consolidate metadata (#3428) |
Stephan Hoyer <s****r@g****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| 6c04c821 | specify default event loop for async tests (#3424) |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| 276b9974 | fix: `ChunkCoords` definition (#3425) |
Lachlan (Lachy) Deakin <l****t@g****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| 7d43f321 |
chore: update pre-commit hooks (#3423)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| b8dbf564 |
chore/unformatted exceptions (#3403)
Co-authored-by: Max Jones <1****s@u****m>, Max Jones <1****s@u****m> |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| 6d4b5e77 |
Remove Store.set_partial_writes (#3413)
Co-authored-by: Davis Bennett <d****t@g****m> |
Stephan Hoyer <s****r@g****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| 710f5dfb | Simplify local store tests (#3414) |
Stephan Hoyer <s****r@g****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| 96a531bf | Use atomic writes for new files in LocalStore (#3412) |
Stephan Hoyer <s****r@g****m>
Committed by: GitHub <n****y@g****m> |
12 months ago | |
| c9509ee4 | generate 3.1.2 release notes (#3404) |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 0e28404b |
Prevent mode='r+' from creating new directories (#3307)
Co-authored-by: Davis Bennett <d****t@g****m> |
David Stansby <d****y@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| dc641fe0 |
Add default value to init_array config param. Update docstring. (#3391)
Co-authored-by: Davis Bennett <d****t@g****m> |
Gabor Kovacs <k****9@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 7970f4a0 | Merge release notes from 3.1.1 (#3399) |
David Stansby <d****y@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| c9eefe66 |
fix chunk/shard iteration (#3299)
Co-authored-by: Bojidar Marinov <b****g@g****m>, Deepak Cherian <d****n@u****m>, Deepak Cherian <d****n@u****m>, Bojidar Marinov <b****g@g****m>, Deepak Cherian <d****n@u****m> |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 94983362 | reraise the `KeyError` for unknown codecs with a more specific error class (#... |
Justus Magin <k****s@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| c019a5f2 |
Added ArrayNotFoundError (#3367)
Co-authored-by: ruaridhg <r****g@u****m>, Davis Bennett <d****t@g****m> |
ruaridhg <3****g@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 0864ee56 |
Use PyPA well-known labels under `project.urls` (#3386)
Co-authored-by: Davis Bennett <d****t@g****m> |
Dimitri Papadopoulos Orfanos <3****s@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| cb389260 | Fix typing in metadata tests (#3393) |
David Stansby <d****y@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 6a546d63 |
chore/add missing tests (#3353)
Co-authored-by: Tom Augspurger <t****8@g****m>, Tom Augspurger <t****8@g****m> |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 4b26501a |
Optimize getitem with empty chunks (#3379)
Co-authored-by: Davis Bennett <d****t@g****m> |
Tom Augspurger <t****r@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| c2c4e21b | Relax obsolete constraints on setuptools-scm (#3385) |
Dimitri Papadopoulos Orfanos <3****s@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| cc2fa37d |
docs: Update the link to sharding in the Zarr roadmap (#3380)
Co-authored-by: Davis Bennett <d****t@g****m> |
Christine P. Chai <s****p@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 7783dc29 | chore/remove chunk coords (#3374) |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 1a4aa5be | Fix: respect write_empty_chunks when opening an existing array (#3378) |
Ian Hunt-Isaak <i****k@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 2271067b | Update docs for user-facing `create_array` api on on `Group`. (#3375) |
Lucy H <5****3@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| c21d1f92 | ensure that we test examples with a fresh env (#3371) |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 90fb2bde |
add numcodec protocol (#3318)
Co-authored-by: Max Jones <1****s@u****m>, Max Jones <1****s@u****m>, Max Jones <1****s@u****m>, Max Jones <1****s@u****m>, Max Jones <1****s@u****m>, Max Jones <1****s@u****m> |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 18419f01 | use local imports in store ABC to avoid circular import issues (#3372) |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| a26926cf |
Bump actions/download-artifact from 4 to 5 in the actions group (#3363)
Co-authored-by: dependabot[bot] <4****]@u****m> Signed-off-by: dependabot[bot] <s****t@g****m> |
dependabot[bot] <4****]@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 926a52fa |
The important metric is project coverage (#3351)
Co-authored-by: Davis Bennett <d****t@g****m> |
Dimitri Papadopoulos Orfanos <3****s@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 1264a4d1 |
Write chunks with negative zero values and a zero fill value (#3216)
Co-authored-by: Davis Bennett <d****t@g****m>, Davis Bennett <d****t@g****m> |
Bojidar Marinov <b****g@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| f087c56f | Fix typos (#3346) |
Dimitri Papadopoulos Orfanos <3****s@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 71cc0c2e |
refactor warnings (#3098)
Co-authored-by: David Stansby <d****y@g****m>, David Stansby <d****y@g****m>, David Stansby <d****y@g****m>, David Stansby <d****y@g****m> |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| e985f1d0 |
chore: update pre-commit hooks (#3337)
Co-authored-by: pre-commit-ci[bot] <6****]@u****m>, David Stansby <d****y@g****m> |
pre-commit-ci[bot] <6****]@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 22b177cc | Fix test coverage (#3334) |
David Stansby <d****y@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 1858af1a | update numpy versions in test case examples (#3331) |
Johannes Soltwedel <3****r@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| e77f803e | pin setuptools-scm to !=9.0.0 (#3329) |
Davis Bennett <d****t@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 6547b7fd | Refactor make_store_path for clarity (#3308) |
David Stansby <d****y@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| e4101730 | Ensure deterministic ordering of consolidated metadata (#3288) |
Lukas Kluft <l****t@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 4eda04eb | Update CI & release checklist for release branch (#3312) |
David Stansby <d****y@g****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| 108ec58d |
Add async oindex and vindex methods to AsyncArray (#3083)
Co-authored-by: Davis Bennett <d****t@g****m> |
Tom Nicholas <t****m@e****o>
Committed by: GitHub <n****y@g****m> |
about 1 year ago | |
| a0c56fbb | prevent matching ... in longer lines (#3298) |
Kimberly Meechan <2****h@u****m>
Committed by: GitHub <n****y@g****m> |
about 1 year ago |