commits

SHA	Message	Author	Date
d1652c32	merge Merge pull request #76 from dllahr/master	AnupJonchhe <2**e@um> Committed by: GitHub <ny@g**m>	about 4 years ago
71bfab6f	pandasGEXpress/tests/python3_tests: some quick fixes to make work with newer ...	Dave Lahr <d**r@f**m>	about 4 years ago
6062b54d	cmapPy/pandasGEXpress/parse_gct.py: add default for new parameter data_type	Dave Lahr <d**r@f**m>	about 4 years ago
8ede51c4	pandasGEXpress/write_gct.py: add fix to write_gct.py in the correct file loca...	Dave Lahr <d**r@f**m>	about 4 years ago
3d521dc9	pandasGEXpress/write_gctx: add more helpful error message if a metadata fiel...	Dave Lahr <d**r@f**m>	about 4 years ago
3f62b89d	Changed line in write_top_half	Valentin Bogachev <4**t@um> Committed by: GitHub <ny@g**m>	about 4 years ago
4a907f42	pandasGEXpress/parse_gct.py: add ability to read from compressed (gzip) gct ...	Dave Lahr <d**r@f**m>	about 4 years ago
d9b65d37	pandasGEXpress/parse.py parse_gct.py: add option to set data type. all use ...	Dave Lahr <d**r@f**m>	about 4 years ago
a93825e8	pandasGEXpress/write_gctx.py: add check and fix to metadata column header and...	Dave Lahr <d**r@f**m>	about 4 years ago
69f51c0e	merge Merge pull request #75 from dllahr/master	Ted Natoli <t**i@gm> Committed by: GitHub <ny@g**m>	almost 5 years ago
4f5a0759	cmapPy/pandasGEXpress/transform_gctoo.py: add code to do transformations on ...	Dave Lahr <d**r@f**m>	almost 5 years ago
e7deb764	merge Merge pull request #73 from dllahr/master	Ted Natoli <t**i@gm> Committed by: GitHub <ny@g**m>	about 5 years ago
c07e44f4	merge Merge pull request #72 from darintay/subset-order	Ted Natoli <t**i@gm> Committed by: GitHub <ny@g**m>	about 5 years ago
2f1fa538	cmapPy/math/fast_corr.py and fast_cov.py: update these routines so they can ...	Dave Lahr <d**r@f**m>	about 5 years ago
b9000358	Optimize gctx subsetting order for memory usage.	Darin Tay <d**y@g**m>	about 5 years ago
efe19454	Update .gitignore	Ted Natoli <t**i@g**m>	over 5 years ago
dbcb3eda	Update cmapPy_pandasGEXpress_tutorial.ipynb	Ted Natoli <t**i@g**m>	over 5 years ago
f3fdf016	cohort_view update	naviddianati <n**i@g**m>	over 6 years ago
bde2d0fc	merge Merge pull request #61 from cmap/dev	jasiedu <j**u@bg> Committed by: GitHub <ny@g**m>	over 6 years ago
28817ff7	merge Merge pull request #58 from saksham219/issue_36	Ted Natoli <t**i@gm> Committed by: GitHub <ny@g**m>	over 6 years ago
a08ddeb5	merge Merge pull request #59 from dllahr/master	Ted Natoli <t**i@gm> Committed by: GitHub <ny@g**m>	over 6 years ago
5f95994e	minor changes	naviddianati <n**i@g**m>	over 6 years ago
a9bf5dc7	merge Merge branch 'dev' of https://github.com/cmap/cmapPy.git into dev	naviddianati <n**i@g**m>	over 6 years ago
7dc505d5	scattergram export figure	naviddianati <n**i@g**m>	over 6 years ago
45207027	print statements removed and relative imports fixed	naviddianati <n**i@g**m>	over 6 years ago
2d6f35c6	merge Merge branch 'master' into dev	naviddianati <n**i@g**m>	over 6 years ago
af6a5f50	Title moved to the right	naviddianati <n**i@g**m>	almost 7 years ago
04b33c2d	minor bugfix	naviddianati <n**i@g**m>	almost 7 years ago
5787b634	bugfix	naviddianati <n**i@g**m>	almost 7 years ago
3d359066	cohort_view added	naviddianati <n**i@g**m>	almost 7 years ago
b66ab19b	minor changes	naviddianati <n**i@g**m>	almost 7 years ago
dc499b3c	category label	naviddianati <n**i@g**m>	almost 7 years ago
a77bb1a8	merge Merge branch 'dev' of https://github.com/cmap/cmapPy into dev	naviddianati <n**i@g**m>	almost 7 years ago
bd6bf09c	bold font for annotations	naviddianati <n**i@g**m>	almost 7 years ago
d7e3a19a	bold font for annotations	naviddianati <n**i@g**m>	almost 7 years ago
24a1eb99	annotations added to stratogram	Navid Dianati <y**u@e**m>	almost 7 years ago
424742fd	visualization subpackage added	naviddianati <n**i@g**m>	almost 7 years ago
a149cbc9	Fixing routing problem for clue.io	Jacob Asiedu <j**u@b**g>	almost 7 years ago
efcf3eb5	fix conflicts	Jacob Asiedu <j**u@b**g>	almost 7 years ago
6407c80c	merge fix conflicts	Jacob Asiedu <j**u@b**g>	almost 7 years ago
275fe586	Fixing routhing issues to RTD	Jacob Asiedu <j**u@b**g>	almost 7 years ago
8b786eda	Update nginx.conf	jasiedu <j**u@bg> Committed by: GitHub <ny@g**m>	almost 7 years ago
5ba4fe45	Removing .idea folder	Jacob Asiedu <j**u@b**g>	almost 7 years ago
00e2c0df	Add Dockerfile to deploy docs	Jacob Asiedu <j**u@b**g>	almost 7 years ago
6db16d3b	Adding Dockerfile for build docs	Jacob Asiedu <j**u@b**g>	almost 7 years ago
908d943a	math/fast_cov.py: add conversion from masked array to regular array at end o...	Dave Lahr <d**r@f**m>	about 7 years ago
a839c6a8	math/fast_corr.py: remove print statement	Dave Lahr <d**r@f**m>	about 7 years ago
2fbd0724	math/tests/test_fast_corr.py: remove accidentally left over import pdb pdb.s...	Dave Lahr <d**r@f**m>	about 7 years ago
e0f442d8	math.tests/fast_cov and fast_corr: added methods for calculating covariance ...	Dave Lahr <d**r@f**m>	about 7 years ago
945d22f8	minor url change	Oana Enache <o**a@bg> Committed by: GitHub <ny@g**m>	about 7 years ago
5c9ea07f	[ref]:fix travis	Saksham Malhotra <s**6@g**m>	about 7 years ago
4123f354	[ref]:change travis config	Saksham Malhotra <s**6@g**m>	about 7 years ago
cc091c9a	[ref]:update function documentations	Saksham Malhotra <s**6@g**m>	about 7 years ago
a1119318	[add]: add new test cases for parse gctx; python3	Saksham Malhotra <s**6@g**m>	about 7 years ago
c5356fee	[add]: add new test cases for parse gctx	Saksham Malhotra <s**6@g**m>	about 7 years ago
e6720fd9	[ref]:add init to math tests dir	Saksham Malhotra <s**6@g**m>	about 7 years ago
2f1a51b0	[ref]:absolute paths in set io tests	Saksham Malhotra <s**6@g**m>	about 7 years ago
5161a3ea	[ref]:make changes to python2 tests	Saksham Malhotra <s**6@g**m>	about 7 years ago
e1508cc8	[ref]:add absolute path for gct	Saksham Malhotra <s**6@g**m>	about 7 years ago
3e450a72	[ref]: add init to test dir	Saksham Malhotra <s**6@g**m>	about 7 years ago
a1153acd	[ref]:change python3 tests for write gctx; give absolute paths in tests	Saksham Malhotra <s**6@g**m>	about 7 years ago
e95ada2a	according to pandas version	Saksham Malhotra <s**6@g**m>	about 7 years ago
a14c557b	[ref]:remove print stateements	Saksham Malhotra <s**6@g**m>	about 7 years ago
06015524	[ref]: add sort to row_meta_only and col_meta_only	Saksham Malhotra <s**6@g**m>	about 7 years ago
67fc6c67	[WIP]: adding test case titles for modified parse_gctx	Saksham Malhotra <s**6@g**m>	about 7 years ago
7dfe6b1f	[add]: paramater to not sort cidx and ridx	Saksham Malhotra <s**6@g**m>	about 7 years ago
6fe86054	merge resolve merge conflict	Saksham Malhotra <s**6@g**m>	about 7 years ago
653ab0b2	merge Merge pull request #56 from saksham219/issue_55	Oana Enache <o**a@bg> Committed by: GitHub <ny@g**m>	about 7 years ago
f66281c5	[ref]:change for old pandas version	Saksham Malhotra <s**6@g**m>	about 7 years ago
da007ebb	[ref]:workaround numpy fix for issue #55	Saksham Malhotra <s**6@g**m>	about 7 years ago
8a039898	[ref]:change dtype of example gctoo if all columns contain Nan	Saksham Malhotra <s**6@g**m>	about 7 years ago
823b052e	[ref]:change dtype of example gctoo if all columns contain Nan	Saksham Malhotra <s**6@g**m>	about 7 years ago
59d833b6	merge Merge pull request #54 from saksham219/python3_compatible	Oana Enache <o**a@bg> Committed by: GitHub <ny@g**m>	over 7 years ago
e465d7d2	[ref]:travis sorted	Saksham Malhotra <s**6@g**m>	over 7 years ago
da99a5f4	[ref]:use python 3.6	Saksham Malhotra <s**6@g**m>	over 7 years ago
8c914d1f	[ref]:typecast to int for python3	Saksham Malhotra <s**6@g**m>	over 7 years ago
fba69610	[ref]:remove print statements	Saksham Malhotra <s**6@g**m>	over 7 years ago
7a313717	[ref]:typecast to int and xrange to range for python3	Saksham Malhotra <s**6@g**m>	over 7 years ago
1d64f24b	[ref]:final change hopefully	Saksham Malhotra <s**6@g**m>	over 7 years ago
a7fa7624	[ref]:again	Saksham Malhotra <s**6@g**m>	over 7 years ago
3af69ef0	[ref]:small travis now	Saksham Malhotra <s**6@g**m>	over 7 years ago
3eb1968b	[ref]:travis changes	Saksham Malhotra <s**6@g**m>	over 7 years ago
53ca4ba8	[ref]:travis changes	Saksham Malhotra <s**6@g**m>	over 7 years ago
cced5c19	[ref]:travis changes	Saksham Malhotra <s**6@g**m>	over 7 years ago
f1c6b09f	[ref]:travis typo fix	Saksham Malhotra <s**6@g**m>	over 7 years ago
1b8e50a0	[ref]:travis matrix built	Saksham Malhotra <s**6@g**m>	over 7 years ago
1d58c36b	[ref]:travis changes	Saksham Malhotra <s**6@g**m>	over 7 years ago
8fbb84a4	[ref]:travis changes	Saksham Malhotra <s**6@g**m>	over 7 years ago
060f4ec8	[ref]:travis changes	Saksham Malhotra <s**6@g**m>	over 7 years ago
7c4a9bcc	[ref]:travis changes	Saksham Malhotra <s**6@g**m>	over 7 years ago
a1538e4e	[ref]:travis yml chages	Saksham Malhotra <s**6@g**m>	over 7 years ago
fa423a68	[ref]:travis yml changes	Saksham Malhotra <s**6@g**m>	over 7 years ago
73df65c6	[ref]:travis config change to test python2 and python3	Saksham Malhotra <s**6@g**m>	over 7 years ago
af79e549	[ref]:class name changed	Saksham Malhotra <s**6@g**m>	over 7 years ago
65e1a153	[add]:python2_python3_compatibility_tests added with gct and gctx files	Saksham Malhotra <s**6@g**m>	over 7 years ago
9e46cf58	[add]:added python2_tests path to travis	Saksham Malhotra <s**6@g**m>	over 7 years ago
48c7acfb	[add]:py2 and py3 tests, functional_tests dir paths updated	Saksham Malhotra <s**6@g**m>	over 7 years ago
dce14ed0	[ref]:remove uncommented code	Saksham Malhotra <s**6@g**m>	over 7 years ago
b87f7624	removed test directories to prior state	Oana Enache <o**a@bg> Committed by: GitHub <ny@g**m>	over 7 years ago
4fb2af26	temporarily added cmapPy/pandasGEXpress/tests_py3/tests to testing path to ev...	Oana Enache <o**a@bg> Committed by: GitHub <ny@g**m>	over 7 years ago

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