GitHub / aidanmorales/rtwig / commits
R package for analyzing and correcting QSMs
| SHA | Message | Author | Date | Stats |
|---|---|---|---|---|
| 25f1efee | Fix empty matlab structs throwing an error on import (issue #30, #31) | aidanmorales <m****9@m****u> | 2 months ago | |
| 65232cb1 | Add closed mesh (issue #27) and other geometry improvements | aidanmorales <m****9@m****u> | 3 months ago | |
| 42717aab | Rework `import_qsm()` and add support for SmartQSM (issue #29). | aidanmorales <m****9@m****u> | 4 months ago | |
| a1616dac | Small fixes to `import_treeqsm()` (issue #28) | aidanmorales <m****9@m****u> | 4 months ago | |
| aae5bde9 | Major updates to TreeQSM I/O (issue #24, issue #28) | aidanmorales <m****9@m****u> | 4 months ago | |
| 59f40080 | Update `twigs` datbase with Italian dataset | aidanmorales <m****9@m****u> | 5 months ago | |
| beae31c8 | Add path stats to `tree_metrics()` | aidanmorales <m****9@m****u> | 7 months ago | |
| e5d44ea4 | Even more updates to tree metrics... | aidanmorales <m****9@m****u> | 7 months ago | |
| 45bae624 | Updates to `tree_metrics()` | aidanmorales <m****9@m****u> | 7 months ago | |
| 649bd3e7 | Updates for issue #25 | aidanmorales <m****9@m****u> | 8 months ago | |
| 6da6c2f7 | More outputs in `tree_metrics()` | aidanmorales <m****9@m****u> | 8 months ago | |
| f02fcee8 | New path and branch metrics in `tree_metrics()` | aidanmorales <m****9@m****u> | 8 months ago | |
| 9a682746 | Update news and fix citation formatting | aidanmorales <m****9@m****u> | 8 months ago | |
| d69ee7df | Add AdTree support | aidanmorales <m****9@m****u> | 8 months ago | |
| 911f4d4c | Update references | aidanmorales <m****9@m****u> | 10 months ago | |
| a6b3a204 | Update documentation | aidanmorales <m****9@m****u> | 11 months ago | |
| 069011aa | `plot_qsm()` now uses dark mode by default for better cylinder and cloud cont... | aidanmorales <m****9@m****u> | 11 months ago | |
| 1478329d | Allow `.$` and `.[[]]` when piping data in functions. | aidanmorales <m****9@m****u> | 11 months ago | |
| 9e663d28 | Improvements to `tree_metrics()` and `export_mat()` with alpha shape, convex ... | aidanmorales <m****9@m****u> | 11 months ago | |
| 1911b2d3 | Improve support for TreeQSM triangulation data (issue #24) | aidanmorales <m****9@m****u> | 11 months ago | |
| 8944267b | Improve `export_mat()` functionality (issue #23) | aidanmorales <m****9@m****u> | 12 months ago | |
| 97146065 | Add AdQSM support (issue #22) | aidanmorales <m****9@m****u> | 12 months ago | |
| 45c88f33 | Bug fixes | aidanmorales <m****9@m****u> | 12 months ago | |
| 6eaf619b | Add new function `download_twigs()` | aidanmorales <m****9@m****u> | about 1 year ago | |
| 66a45df2 | Update paper citation | aidanmorales <m****9@m****u> | about 1 year ago | |
| afd37c16 | Update `plot_qsm()` defaults to be explicit | aidanmorales <m****9@m****u> | over 1 year ago | |
| 4b67cd0e | Fixed a bug in `tree_metrics()` where diameter_mid_cm returned the radius ins... | aidanmorales <m****9@m****u> | over 1 year ago | |
| 79f64733 | Add more options to define cylinder geometry in `reconstruct_qsm()` | aidanmorales <m****9@m****u> | over 1 year ago | |
| bcd8fe53 | Fixed a bug preventing axis aligned cylinders from plotting (issue #21) | aidanmorales <m****9@m****u> | over 1 year ago | |
| eadebcd5 | Fix a bug with cylinder rotation and translation in cluster_cloud() (issue #21) | aidanmorales <m****9@m****u> | over 1 year ago | |
| f5dd984c | New function `reconstruct_qsm()` (issue #21) | aidanmorales <m****9@m****u> | over 1 year ago | |
| 52fa645c | New internal functions to define branch and branch orders using only id, pare... | aidanmorales <m****9@m****u> | over 1 year ago | |
| 229c75e1 | Add GroIMP support to `export_mesh()` (issue #21) | aidanmorales <m****9@m****u> | over 1 year ago | |
| 875263bf | Increment version number to 1.4.0.9000 | aidanmorales <m****9@m****u> | over 1 year ago | |
| 7f5eef83 | Increment version number to 1.4.0 | aidanmorales <m****9@m****u> | over 1 year ago | |
| 5e042188 | Prepare for next CRAN release. | aidanmorales <m****9@m****u> | over 1 year ago | |
| 2fd826a8 | add FaNNI extended .obj format support (issue #17) | aidanmorales <m****9@m****u> | over 1 year ago | |
| 45097708 | Update Dictionary vignette and some function defaults (issue #13, issue #19) | aidanmorales <m****9@m****u> | over 1 year ago | |
| 589349b3 | Add path fraction to `tree_metrics()` | aidanmorales <m****9@m****u> | over 1 year ago | |
| 40c7e0be | Improve `plot_qsm()` (issue #19), update documentation, and other small changes | aidanmorales <m****9@m****u> | over 1 year ago | |
| cfe678d3 | Rework `export_mesh()` function (issue #17) | aidanmorales <m****9@m****u> | over 1 year ago | |
| b4f3ccd6 | Initial leaf support (issue #17) | aidanmorales <m****9@m****u> | over 1 year ago | |
| db6539f4 | Add more checks for `tree_metrics()` stem taper (issue #18) | aidanmorales <m****9@m****u> | over 1 year ago | |
| 43e89945 | More `tree_metrics()` improvements for issue #18 | aidanmorales <m****9@m****u> | over 1 year ago | |
| 021ec908 | `plot_qsm()` improvements for point clouds and triangulation meshes | aidanmorales <m****9@m****u> | over 1 year ago | |
| b1fa570d | Update function names according to tidy and R guidelines. | aidanmorales <m****9@m****u> | over 1 year ago | |
| be7a7d8a | `tree_metrics()` improvements for issue #18 | aidanmorales <m****9@m****u> | over 1 year ago | |
| 34888c88 | Update licensing and package citation to 2025 | aidanmorales <m****9@m****u> | over 1 year ago | |
| 58782273 | Try setting env RGL_USE_NULL: TRUE | aidanmorales <m****9@m****u> | over 1 year ago | |
| af01a911 | test fix | aidanmorales <m****9@m****u> | over 1 year ago | |
| b8a3ad3f | Try setting rgl.useNULL = TRUE | aidanmorales <m****9@m****u> | over 1 year ago | |
| af8b6d5d | Try MacOS build environment | aidanmorales <m****9@m****u> | over 1 year ago | |
| 0eb62018 | Test rgl dependencies on ubuntu-latest | aidanmorales <m****9@m****u> | over 1 year ago | |
| c78c315a | Test fix for pkgdown rgl display issues | aidanmorales <m****9@m****u> | over 1 year ago | |
| 54e78228 | Updates to `tree_metrics()` & documentations | aidanmorales <m****9@m****u> | over 1 year ago | |
| 723ba221 | New function `export_blender()` (issue #17) | aidanmorales <m****9@m****u> | over 1 year ago | |
| dc0557b6 | Add allometric variables to `tree` in `tree_metrics()` | aidanmorales <m****9@m****u> | over 1 year ago | |
| 1d3af069 | More modification indices to `tree_metrics()` | aidanmorales <m****9@m****u> | over 1 year ago | |
| 9ce83ab6 | Test parameter for `tree_metrics()` (issue #16) | aidanmorales <m****9@m****u> | over 1 year ago | |
| bfaecb4f | Fixed an issue with crown base calcuations in `tree_metrics()` | aidanmorales <m****9@m****u> | over 1 year ago | |
| 2246ba4b | Update twig data and vignette | aidanmorales <m****9@m****u> | over 1 year ago | |
| 8c7d1213 | `tree_metrics()` improvements and bug fixes (issue #15) | aidanmorales <m****9@m****u> | over 1 year ago | |
| fb36eaaf | Fix missing `modified` column in `tree_metrics()` if `correct_radii()` was no... | aidanmorales <m****9@m****u> | over 1 year ago | |
| d90b8d3b | Add a modification index to the `tree_metrics()` output | aidanmorales <m****9@m****u> | over 1 year ago | |
| 8db6fd93 | Add more random color functionality to `plot_qsm()` | aidanmorales <m****9@m****u> | over 1 year ago | |
| f245730e | Verify `color` exists in `plot_qsm()` before checking column names | aidanmorales <m****9@m****u> | over 1 year ago | |
| f256640e | Fix for issue #12 in `plot_qsm()` | aidanmorales <m****9@m****u> | over 1 year ago | |
| 4c351570 | Increment version number to 1.3.0.9000 | aidanmorales <m****9@m****u> | over 1 year ago | |
| 99005e14 | Update revdep results and cran-comments | aidanmorales <m****9@m****u> | over 1 year ago | |
| 4c77bfec | Prepare for new CRAN release | aidanmorales <m****9@m****u> | over 1 year ago | |
| 409a0cfa | Updates to `tree_metrics()` to resolve issue #8 | aidanmorales <m****9@m****u> | over 1 year ago | |
| 9ada97f1 | Add r-hub v2 checks | aidanmorales <m****9@m****u> | over 1 year ago | |
| 0d6081ff | Fix for fedora error | aidanmorales <m****9@m****u> | over 1 year ago | |
| 8b18947e | indent fix | aidanmorales <m****9@m****u> | over 1 year ago | |
| 1816f009 | Add clang actions check on R dev branch | aidanmorales <m****9@m****u> | over 1 year ago | |
| 091f1d33 | Add more checks to GitHub actions | aidanmorales <m****9@m****u> | over 1 year ago | |
| 66850bd3 | Fix for issue #10 | aidanmorales <m****9@m****u> | over 1 year ago | |
| c94fa706 | Add QSM connectivity check to tree_metrics() | aidanmorales <m****9@m****u> | over 1 year ago | |
| 72606a81 | Update Validation vignette | aidanmorales <m****9@m****u> | over 1 year ago | |
| c9071259 | Polish documentation | aidanmorales <m****9@m****u> | over 1 year ago | |
| e7014561 | Fixes and improvements for issue #7 | aidanmorales <m****9@m****u> | over 1 year ago | |
| 5b705671 | Add proper warning messages to plot_qsm() | aidanmorales <m****9@m****u> | over 1 year ago | |
| dbea030d | Fixed color vector bug in plot_qsm() (issue #9). | aidanmorales <m****9@m****u> | almost 2 years ago | |
| deb24628 | Random colors are now brighter and easier to see | aidanmorales <m****9@m****u> | almost 2 years ago | |
| f09e7a8d | Increment version number to 1.2.0.9000 | aidanmorales <m****9@m****u> | almost 2 years ago | |
| 47d65682 | Fix paper DOI for CRAN. | aidanmorales <m****9@m****u> | almost 2 years ago | |
| 1466fe7f | Increment version number to 1.2.0 | aidanmorales <m****9@m****u> | almost 2 years ago | |
| e5edb902 | Update reverse dependency check results | aidanmorales <m****9@m****u> | almost 2 years ago | |
| 7c387dbe | Small changes for CRAN | aidanmorales <m****9@m****u> | almost 2 years ago | |
| e7b04bdc | Prepare for new release! | aidanmorales <m****9@m****u> | almost 2 years ago | |
| e6b4e0fc | Test fix for MacOS build failing | aidanmorales <m****9@m****u> | almost 2 years ago | |
| bde534dc | Fix wrong tree start coordinates in tree_metrics(). | aidanmorales <m****9@m****u> | almost 2 years ago | |
| 1713709d | Require minimum RGL version and add backwards compatibility to verify_cylinde... | aidanmorales <m****9@m****u> | almost 2 years ago | |
| 7c790770 | Fix for issue #5. | aidanmorales <m****9@m****u> | almost 2 years ago | |
| c7539119 | Check inputs and add helpful and tidy error messages and suggestions for all ... | aidanmorales <m****9@m****u> | almost 2 years ago | |
| 6d4b95fb | Add {{ }} to tree_metrics() | aidanmorales <m****9@m****u> | almost 2 years ago | |
| d7cacd10 | Use {{ }} instead of !!rlang::sym() for cleaner code. | aidanmorales <m****9@m****u> | almost 2 years ago | |
| 1c741c1f | Update header file structure | aidanmorales <m****9@m****u> | almost 2 years ago | |
| e246598e | New function cluster_qsm() | aidanmorales <m****9@m****u> | almost 2 years ago | |
| 5ff5a28c | Bug fixes in correct_radii() | aidanmorales <m****9@m****u> | almost 2 years ago |