GitHub / Open-Science-Tools/nd2reader / commits
| SHA | Message | Author | Date | Stats |
|---|---|---|---|---|
| 6d825725 | Update README.md |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 207aa8b4 | Fix GH workflow versions | Ruben Verweij <r****n@k****l> | over 1 year ago | |
| 8b7bc132 | Update to version 3.3.1 | Ruben Verweij <r****n@k****l> | over 1 year ago | |
| 23b4c8c9 | merge Merge pull request #70 from mansouralawi/mansour/numpy_error |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 5a606801 | Update python-package.yml |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| f73b658f | Update CONTRIBUTING.md |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 423acdec | Update README.md |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| bea71631 | Update numpy requirements.txt |
Mansour Alawi <m****i@g****m>
Committed by: GitHub <n****y@g****m> |
over 1 year ago | |
| 9b143c92 | fix numpy float type | Mansour Alawi <m****i@g****m> | almost 3 years ago | |
| 4956ec89 | merge Merge pull request #60 from zjniu/master |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
over 4 years ago | |
| 5bc0acf1 | Update stitched.py |
William Niu <8****u@u****m>
Committed by: GitHub <n****y@g****m> |
over 4 years ago | |
| e44d392b | Update README.md |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
about 5 years ago | |
| 29b92592 | Delete .codeclimate.yml |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
about 5 years ago | |
| b7d74c65 | Delete code-climate.yml |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
about 5 years ago | |
| ab4d65b6 | Rename build script & try to add code climate coverage | Ruben Verweij <r****n@l****l> | about 5 years ago | |
| f74ca2b9 | Remove travis, migrate to github actions | Ruben Verweij <r****n@l****l> | about 5 years ago | |
| 7c6495a7 | Update README.md |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
about 5 years ago | |
| 335ffc36 | Update python-package.yml |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
about 5 years ago | |
| 2315ec3a | Create python-package.yml |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
about 5 years ago | |
| e7fb670b | Version 3.3.0 | Ruben Verweij <r****n@l****l> | over 5 years ago | |
| af7ce894 | Install package on travis to correctly get version number | Ruben Verweij <r****n@l****l> | over 5 years ago | |
| 8f5b24da | Test importlib import on travis | Ruben Verweij <r****n@l****l> | over 5 years ago | |
| 4d0da771 | Test importlib import on travis | Ruben Verweij <r****n@l****l> | over 5 years ago | |
| 7e5297f7 | merge Merge branch 'master' of github.com:rbnvrw/nd2reader | Ruben Verweij <r****n@l****l> | over 5 years ago | |
| 74d49b15 | Update dependencies | Ruben Verweij <r****n@l****l> | over 5 years ago | |
| b18c89b7 | Update release.txt |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
over 5 years ago | |
| 75207959 | Fix #42: read version number from setup.py | Ruben Verweij <r****n@l****l> | over 5 years ago | |
| e7d686d3 | Fixes issue #50 | Ruben Verweij <r****n@l****l> | over 5 years ago | |
| df6d70e7 | merge Merge pull request #43 from ggirelli/ggirelli-filename-patch |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
almost 6 years ago | |
| e02dd3c2 | Fixed missing filename path. |
Gabriele Girelli <g****0@g****m>
Committed by: GitHub <n****y@g****m> |
almost 6 years ago | |
| 18527bf9 | merge Merge pull request #40 from ggirelli/ggirelli-patch-parser-for-stitched-images |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
almost 6 years ago | |
| 5fafcf1b | Update stitched.py |
Gabriele Girelli <g****0@g****m>
Committed by: GitHub <n****y@g****m> |
about 6 years ago | |
| cbb27ba3 | merge Merge pull request #39 from ggirelli/ggirelli-patch-nd2reader-from-file |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
about 6 years ago | |
| 1a2bfffd | Fixed func def | Gabriele Girelli <g****0@g****m> | about 6 years ago | |
| b3421d56 | Refactored. | Gabriele Girelli <g****0@g****m> | about 6 years ago | |
| af6e8365 | Added get_image test of stitched sample | Gabriele Girelli <g****0@g****m> | about 6 years ago | |
| 55627552 | Using numpy assets when possible, and formatted with black | Gabriele Girelli <g****0@g****m> | about 6 years ago | |
| 699e7105 | Switched from warning to raising exception and improved message | Gabriele Girelli <g****0@g****m> | about 6 years ago | |
| 613d86db | Improved assert and warning messages | Gabriele Girelli <g****0@g****m> | about 6 years ago | |
| 09dedf20 | Fixed new init method | Gabriele Girelli <g****0@g****m> | about 6 years ago | |
| 9a7945d7 | Implemented test. | Gabriele Girelli <g****0@g****m> | about 6 years ago | |
| fca6cb1c | Allowed for fh to be either str or IO, and formatted with black. | Gabriele Girelli <g****0@g****m> | about 6 years ago | |
| 2a3c1a31 | Changed structure to check/remove method pair |
Gabriele Girelli <g****0@g****m>
Committed by: GitHub <n****y@g****m> |
about 6 years ago | |
| db5d8e3f | Allowing case of multiple unwanted bytes per step |
Gabriele Girelli <g****0@g****m>
Committed by: GitHub <n****y@g****m> |
about 6 years ago | |
| 25f7e5f6 | Complexity |
Gabriele Girelli <g****0@g****m>
Committed by: GitHub <n****y@g****m> |
about 6 years ago | |
| 72cf9fca | Update parser.py |
Gabriele Girelli <g****0@g****m>
Committed by: GitHub <n****y@g****m> |
about 6 years ago | |
| b2a3b887 | Complexity |
Gabriele Girelli <g****0@g****m>
Committed by: GitHub <n****y@g****m> |
about 6 years ago | |
| 27ed229f | Fixed complexity |
Gabriele Girelli <g****0@g****m>
Committed by: GitHub <n****y@g****m> |
about 6 years ago | |
| 2daaa53a | Regenerated Reader |
Gabriele Girelli <g****0@g****m>
Committed by: GitHub <n****y@g****m> |
about 6 years ago | |
| 24105451 | Fixed complexity |
Gabriele Girelli <g****0@g****m>
Committed by: GitHub <n****y@g****m> |
about 6 years ago | |
| 93949b33 | Removed empty bytes at channel subchunk ends |
Gabriele Girelli <g****0@g****m>
Committed by: GitHub <n****y@g****m> |
about 6 years ago | |
| 5090f930 | Update reader.py |
Gabriele Girelli <g****0@g****m>
Committed by: GitHub <n****y@g****m> |
about 6 years ago | |
| 492d0ec6 | update Travis settings | Ruben Verweij <r****n@l****l> | over 6 years ago | |
| eeb4bd10 | Fix issue #34 | Ruben Verweij <r****n@l****l> | over 6 years ago | |
| 740b8b11 | Use timesteps as fallback to NDExperiment loops to determine total file durat... | Ruben Verweij <r****n@l****l> | over 6 years ago | |
| 607c1e62 | Fix error in loop handling | Ruben Verweij <r****n@l****l> | over 6 years ago | |
| 9b2f9ca2 | merge Merge pull request #32 from ulugbekna/handle-invalid-file-extension |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
over 6 years ago | |
| 5816df19 | merge Merge pull request #1 from ggirelli/patch-1 |
Ulugbek Abdullaev <u****a@g****m>
Committed by: GitHub <n****y@g****m> |
over 6 years ago | |
| 595978cd | f-strings not supported by Python3.6- |
Gabriele Girelli <g****0@g****m>
Committed by: GitHub <n****y@g****m> |
over 6 years ago | |
| 995d920e | Fix typo in z-level check | Ruben Verweij <v****j@p****l> | over 6 years ago | |
| 74d384ee | merge Merge pull request #33 from ggirelli/master |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
over 6 years ago | |
| 1728086d | Fix codeclimate integration |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
over 6 years ago | |
| a16702bb | Update README.md |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
over 6 years ago | |
| 0e16251a | Remove support for Python < 3.5 |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
over 6 years ago | |
| 1c6f5173 | Removed self.__class__ from super() call |
Gabriele Girelli <g****0@g****m>
Committed by: GitHub <n****y@g****m> |
over 6 years ago | |
| 4eea6a81 | Version 3.2.3 due to build error of new version number storage system | Ruben Verweij <v****j@p****l> | over 6 years ago | |
| fe644d24 | merge Merge branch 'master' of github.com:rbnvrw/nd2reader | Ruben Verweij <v****j@p****l> | over 6 years ago | |
| 1d560969 | New version 3.2.2 | Ruben Verweij <v****j@p****l> | over 6 years ago | |
| de6a4951 | Update release.txt |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
over 6 years ago | |
| 538910ba | add a check that filename passed to nd2reader has an extension .nd2 because t... | Ulugbek Abdullaev <u****a@g****m> | over 6 years ago | |
| 312e0889 | merge Merge pull request #30 from rbnvrw/add-code-of-conduct-1 |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
almost 7 years ago | |
| 5854a59d | Create CODE_OF_CONDUCT.md |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
almost 7 years ago | |
| b6fdeb60 | merge Merge pull request #28 from ggirelli/master |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
almost 7 years ago | |
| 30cc7d74 | Update raw_metadata.py |
Gabriele Girelli <g****0@g****m>
Committed by: GitHub <n****y@g****m> |
almost 7 years ago | |
| 64679f94 | Update raw_metadata.py |
Gabriele Girelli <g****0@g****m>
Committed by: GitHub <n****y@g****m> |
almost 7 years ago | |
| b87b5f66 | Update raw_metadata.py |
Gabriele Girelli <g****0@g****m>
Committed by: GitHub <n****y@g****m> |
almost 7 years ago | |
| 810682c6 | Using Z slice coordinates from Z-data instead of Z-levels and show warning in... | Gabriele Girelli <g****0@g****m> | almost 7 years ago | |
| 3c24672e | Resolve issue #24 | Ruben Verweij <r****n@l****l> | almost 7 years ago | |
| 2a21784d | Issue #24: only return a Frame when bundle_axes is only y,x | Ruben Verweij <r****n@l****l> | almost 7 years ago | |
| 4430f19d | merge Merge branch 'master' of github.com:rbnvrw/nd2reader | Ruben Verweij <r****n@l****l> | almost 7 years ago | |
| be1be6ae | Update get_frame_vczyx function based on feedback in issue #24 | Ruben Verweij <r****n@l****l> | almost 7 years ago | |
| bddf4e00 | Update release.txt |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
almost 7 years ago | |
| 7e684ac6 | Make unit test less specific to accomodate for different versions of struct | Ruben Verweij <r****n@l****l> | almost 7 years ago | |
| f83387ce | Fixes issue #25, adds unit tests and release 3.2.1 | Ruben Verweij <r****n@l****l> | almost 7 years ago | |
| 2af560aa | Fixes issue 25 | Ruben Verweij <v****j@p****l> | almost 7 years ago | |
| b17c9d1c | merge Merge branch 'master' of github.com:rbnvrw/nd2reader | Ruben Verweij <v****j@p****l> | almost 7 years ago | |
| 06de827f | Fix issue with bundle_axes and get_frame | Ruben Verweij <v****j@p****l> | almost 7 years ago | |
| c9ec3848 | Update release.txt |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
almost 7 years ago | |
| 3f3464f2 | Update version 3.2.0 | Ruben Verweij <v****j@p****l> | almost 7 years ago | |
| 30b2ad9c | merge Merge branch 'master' of github.com:rbnvrw/nd2reader | Ruben Verweij <v****j@p****l> | almost 7 years ago | |
| 14fa586e | Version 3.2.0 | Ruben Verweij <v****j@p****l> | almost 7 years ago | |
| 75b78caf | merge Merge pull request #22 from WMAPernice/fix-missing-frames-issue_to-current-ma... |
Ruben Verweij <r****w@u****m>
Committed by: GitHub <n****y@g****m> |
almost 7 years ago | |
| d8441442 | More informative warning if gap frames encountered and filled with np.nan | unknown <w****1@c****u> | almost 7 years ago | |
| f07eab01 | Handle gap frames with np.nan-filled array and issue warning about it. | unknown <w****1@c****u> | almost 7 years ago | |
| e9cd68bd | removed NoImageError call, class def, and import references since now redundant | unknown <w****1@c****u> | almost 7 years ago | |
| 9e035888 | Add acquisition times to parser | Ruben Verweij <r****n@l****l> | almost 7 years ago | |
| cd55b8ff | Fixes issue #11 | Ruben Verweij <r****n@l****l> | almost 7 years ago | |
| de1c2aff | Fixes issue #16 | Ruben Verweij <r****n@l****l> | almost 7 years ago | |
| c92b7868 | Fallback function for old get_frame_2D function | Ruben Verweij <r****n@l****l> | almost 7 years ago | |
| ae00cc12 | fix to allow reading of ND2-files with missing frames, due to e.g. skipping z... | unknown <w****1@c****u> | almost 7 years ago |