Illumina/manta

Commits: 1,931

Illumina/strelka

Strelka2 germline and somatic small variant caller

Commits: 1,921

Illumina/pyflow

A lightweight parallel task engine

Commits: 112

illumina/expansionhunter

A tool for estimating repeat sizes

Commits: 4

OpenMS/bioconda-recipes

Conda recipes for the bioconda channel.

Commits: 4

bioconda/bioconda-recipes

Conda recipes for the bioconda channel.

Commits: 4

acenglish/truvari

Commits: 3

igvteam/igv

Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

Commits: 2

samtools/htslib

Commits: 2

pandoc/lua-filters

Commits: 1

hadley/r4ds

R for data science: a book

Commits: 1

smarco/WFA2-lib

Commits: 1

nsbuitrago/libparasail-sys

Commits: 1

broadgsa/gatk

Commits: 1

luntergroup/octopus

Commits: 1

kwstat/r4ds

Commits: 1

lh3/minibwa

Commits: 1

rust-bio/rust-htslib

This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.

Commits: 1